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Molecular Dynamics Replicated Data Model
written by
Wolfgang Christian
The Molecular Dynamics Replicated Data Model implements a parallel computer program that uses a 3D Lennard-Jones potential truncated at a distance of three molecular diameters. Each thread computes a portion of the force on each atom and these contributions are summed to compute the total acceleration using the Verlet ODE algorithm. Allocating memory for each thread's avoids the problem of parallel threads simultaneously writing to array elements.
The Molecular Dynamics Replicated Data Model was developed using the Easy Java Simulations (EJS) modeling tool. It is distributed as a ready-to-run (compiled) Java archive. Please note that this resource requires at least version 1.7 of Java (JRE). 
Molecular Dynamics Replicated Data Modeldownload 3754kb .jar Published: August 30, 2013 previous versions 
Parallel Programming TutorialA step-by-step introduction to parallel programming in Java using EJS. download 2083kb .pdf Last Modified: December 22, 2017
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Record Link
<a href="https://www.compadre.org/portal/items/detail.cfm?ID=12987">Christian, Wolfgang. "Molecular Dynamics Replicated Data Model." Version 1.0.</a>
AIP Format
W. Christian, Computer Program MOLECULAR DYNAMICS REPLICATED DATA MODEL, Version 1.0 (2013), WWW Document, (https://www.compadre.org/Repository/document/ServeFile.cfm?ID=12987&DocID=3559).
AJP/PRST-PER
W. Christian, Computer Program MOLECULAR DYNAMICS REPLICATED DATA MODEL, Version 1.0 (2013), <https://www.compadre.org/Repository/document/ServeFile.cfm?ID=12987&DocID=3559>.
APA Format
Christian, W. (2013). Molecular Dynamics Replicated Data Model (Version 1.0) [Computer software]. Retrieved April 26, 2024, from https://www.compadre.org/Repository/document/ServeFile.cfm?ID=12987&DocID=3559
Chicago Format
Christian, Wolfgang. "Molecular Dynamics Replicated Data Model." Version 1.0. https://www.compadre.org/Repository/document/ServeFile.cfm?ID=12987&DocID=3559 (accessed 26 April 2024).
MLA Format
Christian, Wolfgang. Molecular Dynamics Replicated Data Model. Vers. 1.0. Computer software. 2013. Java (JRE) 1.7. 26 Apr. 2024 <https://www.compadre.org/Repository/document/ServeFile.cfm?ID=12987&DocID=3559>.
BibTeX Export Format
@misc{
Author = "Wolfgang Christian",
Title = {Molecular Dynamics Replicated Data Model},
Month = {August},
Year = {2013}
}
Refer Export Format
%A Wolfgang Christian %T Molecular Dynamics Replicated Data Model %D August 30, 2013 %U https://www.compadre.org/Repository/document/ServeFile.cfm?ID=12987&DocID=3559 %O 1.0 %O application/java
EndNote Export Format
%0 Computer Program %A Christian, Wolfgang %D August 30, 2013 %T Molecular Dynamics Replicated Data Model %7 1.0 %8 August 30, 2013 %U https://www.compadre.org/Repository/document/ServeFile.cfm?ID=12987&DocID=3559 Disclaimer: ComPADRE offers citation styles as a guide only. We cannot offer interpretations about citations as this is an automated procedure. Please refer to the style manuals in the Citation Source Information area for clarifications.
Citation Source Information
The AIP Style presented is based on information from the AIP Style Manual. The APA Style presented is based on information from APA Style.org: Electronic References. The Chicago Style presented is based on information from Examples of Chicago-Style Documentation. The MLA Style presented is based on information from the MLA FAQ. This resource is stored in a shared folder. You must login to access shared folders. Molecular Dynamics Replicated Data Model:
Is Based On
Easy Java Simulations Modeling and Authoring Tool
The Easy Java Simulations Modeling and Authoring Tool is needed to explore the computational model used in the Molecular Dynamics Replicated Data Model. relation by Wolfgang ChristianKnow of another related resource? Login to relate this resource to it. |
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