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written by Wolfgang Christian
The Molecular Dynamics Replicated Data Model implements a parallel computer program that uses a 3D Lennard-Jones potential truncated at a distance of three molecular diameters.  Each thread computes a portion of the force on each atom and these contributions are summed to compute the total acceleration using the Verlet ODE algorithm.  Allocating memory for each thread's avoids the problem of parallel threads simultaneously writing to array elements.

The Molecular Dynamics Replicated Data Model was developed using the Easy Java Simulations (EJS) modeling tool.  It is distributed as a ready-to-run (compiled) Java archive.

Please note that this resource requires at least version 1.6 of Java (JRE).
View the source code document attached to this resource
Subjects Levels Resource Types
Thermo & Stat Mech
- Models
= Lennard-Jones Potential
- Upper Undergraduate
- Graduate/Professional
- Lower Undergraduate
- Instructional Material
= Interactive Simulation
Intended Users Formats Ratings
- Learners
- Educators
- application/java
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Access Rights:
Free access
Program released under GNU-GPL. Narrative is copyrighted.
License:
This material is released under a GNU General Public License Version 3 license.
Rights Holder:
Wolfgang Christian
PACSs:
01.50.hv
07.05.Tp
05.10.-a
Record Cloner:
Metadata instance created August 30, 2013 by Wolfgang Christian
Record Updated:
August 13, 2014 by Wolfgang Christian
Last Update
when Cataloged:
August 30, 2013
Other Collections:

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Record Link
AIP Format
W. Christian, Computer Program MOLECULAR DYNAMICS REPLICATED DATA MODEL, Version 1.0 (2013), WWW Document, (http://www.compadre.org/Repository/document/ServeFile.cfm?ID=12987&DocID=3559).
AJP/PRST-PER
W. Christian, Computer Program MOLECULAR DYNAMICS REPLICATED DATA MODEL, Version 1.0 (2013), <http://www.compadre.org/Repository/document/ServeFile.cfm?ID=12987&DocID=3559>.
APA Format
Christian, W. (2013). Molecular Dynamics Replicated Data Model (Version 1.0) [Computer software]. Retrieved November 28, 2014, from http://www.compadre.org/Repository/document/ServeFile.cfm?ID=12987&DocID=3559
Chicago Format
Christian, Wolfgang. "Molecular Dynamics Replicated Data Model." Version 1.0. http://www.compadre.org/Repository/document/ServeFile.cfm?ID=12987&DocID=3559 (accessed 28 November 2014).
MLA Format
Christian, Wolfgang. Molecular Dynamics Replicated Data Model. Vers. 1.0. Computer software. 2013. Java (JRE) 1.6. 28 Nov. 2014 <http://www.compadre.org/Repository/document/ServeFile.cfm?ID=12987&DocID=3559>.
BibTeX Export Format
@misc{ Author = "Wolfgang Christian", Title = {Molecular Dynamics Replicated Data Model}, Month = {August}, Year = {2013} }
Refer Export Format

%A Wolfgang Christian
%T Molecular Dynamics Replicated Data Model
%D August 30, 2013
%U http://www.compadre.org/Repository/document/ServeFile.cfm?ID=12987&DocID=3559
%O 1.0
%O application/java

EndNote Export Format

%0 Computer Program
%A Christian, Wolfgang
%D August 30, 2013
%T Molecular Dynamics Replicated Data Model
%7 1.0
%8 August 30, 2013
%U http://www.compadre.org/Repository/document/ServeFile.cfm?ID=12987&DocID=3559


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The AIP Style presented is based on information from the AIP Style Manual.

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Molecular Dynamics Replicated Data Model:

Is Based On Easy Java Simulations Modeling and Authoring Tool

The Easy Java Simulations Modeling and Authoring Tool is needed to explore the computational model used in the Molecular Dynamics Replicated Data Model.

relation by Wolfgang Christian

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