Molecular Dynamics Replicated Data Model Documents
This material has 2 associated documents. Select a document title to view a document's information.
The Molecular Dynamics Replicated Data Model implements a parallel computer program that uses a 3D Lennard-Jones potential truncated at a distance of three molecular diameters. Each thread computes a portion of the force on each atom and these contributions are summed to compute the total acceleration using the Verlet ODE algorithm. Allocating memory for each thread's avoids the problem of parallel threads simultaneously writing to array elements.
Published August 30, 2013
This file has previous versions.
Source Code Documents
The source code zip archive contains an XML representation of the Molecular Dynamics Replicated Data Model. Unzip this archive in your Ejs workspace to compile and run this model using EJS.
Last Modified August 30, 2013